{"id":46783,"date":"2017-03-30T08:42:18","date_gmt":"2017-03-30T15:42:18","guid":{"rendered":"http:\/\/in.nau.edu\/news\/?p=46783"},"modified":"2017-03-30T08:42:18","modified_gmt":"2017-03-30T15:42:18","slug":"bridget-barker","status":"publish","type":"post","link":"https:\/\/in.nau.edu\/news\/bridget-barker\/","title":{"rendered":"Valley fever research a labor of love for NAU biotechnologist"},"content":{"rendered":"<p>Bridget Barker remembers the day a doctor found a weird nodule in one of her lungs.<\/p>\n<p>The Northern Arizona University biology professor felt a moment of panic\u2014lung cancer!\u2014before her brain asserted the likelier possibility. At some point the biology professor had been exposed to Valley fever, a fungal infection common in the hot, dry regions of Arizona, and her body had fought off the infection without making her sick. The nodule was a self-contained bundle of fungal spores and the dead white blood cells her body had sent to attack it. It was likely harmless\u2014likely being the operative word.<\/p>\n<p>Even Barker, who has studied Valley fever since 2002, doesn\u2019t know the future of that nodule in her lung. It\u2019s possible it could lie dormant for the rest of her life with no more effects than when it popped up the first time. It\u2019s also possible at some point it could be triggered, releasing the fungal spores back into her body. The disease is so understudied scientists just don\u2019t know what happens with long-term infections.<\/p>\n<p>\u201cFungal diseases are really off the radar,\u201d Barker said. \u201cThere\u2019s not a lot of people working on it, so there\u2019s a lot we don\u2019t know.\u201d<\/p>\n<p>Barker started with Northern Arizona University\u2019s <a href=\"http:\/\/www.mggen.nau.edu\/\">Pathogen and Microbiome Institute<\/a> in August after years of studying <em>Coccidioidomycosis<\/em> (<em>Cocci<\/em> for short) and Valley fever in her doctoral program at the University of Arizona and more recently in the private sector. In that time she\u2019s learned much about the fungus and the disease it spawns, but most importantly she\u2019s learned how much further science has to go in understanding <em>Cocci<\/em> and Valley fever.<\/p>\n<p><strong>Barker\u2019s research<\/strong><\/p>\n<figure id=\"attachment_46823\" aria-describedby=\"caption-attachment-46823\" style=\"width: 150px\" class=\"wp-caption alignleft\"><a href=\"http:\/\/in.nau.edu\/news\/wordpresst\/uploads\/sites\/153\/wp-content\/uploads\/2017\/03\/085e64_9eac18657ded41c5a1ccf8515edb092d-mv2.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-46823 size-thumbnail\" src=\"http:\/\/in.nau.edu\/news\/wordpresst\/uploads\/sites\/153\/wp-content\/uploads\/2017\/03\/085e64_9eac18657ded41c5a1ccf8515edb092d-mv2-150x150.jpg\" alt=\"NAU's Bridget Barker\" width=\"150\" height=\"150\" srcset=\"https:\/\/in.nau.edu\/wp-content\/uploads\/sites\/402\/2017\/03\/085e64_9eac18657ded41c5a1ccf8515edb092d-mv2-150x150.jpg 150w, https:\/\/in.nau.edu\/wp-content\/uploads\/sites\/402\/2017\/03\/085e64_9eac18657ded41c5a1ccf8515edb092d-mv2.jpg 256w\" sizes=\"auto, (max-width: 150px) 100vw, 150px\" \/><\/a><figcaption id=\"caption-attachment-46823\" class=\"wp-caption-text\">Bridget Barker<\/figcaption><\/figure>\n<p>Barker got into Valley fever almost by accident; her husband was accepted into a graduate program at U of A; she looked for a job there and found an opening in a biosafety level (BSL) 3 lab. It would give her skills she\u2019d likely need in future labs and an opportunity to work with interesting organisms.<\/p>\n<p>Her interest in <em>Cocci<\/em> grew as she worked with it, but she picked that fungus for a more personal reason as well: both her husband and her dog suffered severe cases of Valley fever while they lived in Tucson, and unbeknownst to her she picked up the fungus as well. Her husband recovered fully; her dog had a relapse but eventually recovered. Regardless, she\u2019d found her passion.<\/p>\n<p>Even after all these years, though, it remains a tricky disease. Earlier studies showed about 60 percent of infected people showed no symptoms and had no idea they were infected; Barker said the scientific community still feels comfortable with those numbers. The majority of those remaining can get quite sick with pneumonia or severe flulike symptoms but eventually fully recover. Some were correctly diagnosed and treated with antifungal medication; others simply fought it off over time.<\/p>\n<p>&nbsp;<\/p>\n<p>But a few people get sick and keep getting sicker, sometimes fighting the illness for months at a time. They\u2019re frequently misdiagnosed and sent home with antibiotics or antiviral medication, which in the best cases were ineffective and in the worst cases made the illness worse. One man, the subject of a journal article Barker recently reviewed, was in and out of doctor\u2019s offices for a year with a variety of symptoms. By the time he was correctly diagnosed, the fungus had overwhelmed his body and he died soon after.<\/p>\n<p>\u201cHe had it everywhere,\u201d she said. \u201cHe had it in his lungs, his spleen, his GI tract. It was awful.\u201d<\/p>\n<p>Everything Barker knows about <em>Cocci<\/em> and Valley fever leads her to four possible conclusions: some feature about the fungus itself influences severity of the illness (different strains of <em>Cocci<\/em>, exposure to more spores); some host factor dictates severity (weakened immune system, genetic background); the amount of exposure from the environmental (how many spores a person breathes in); or some combination of the three. Her research centers around those possible outcomes.<\/p>\n<p>\u201cThe big, overarching question that drives pretty much everything in my lab is what explains the variation in disease,\u201d Barker said. \u201cWhy do some people get really, really sick and other people seem to have no symptoms?\u201d<\/p>\n<p>Right now in her lab she\u2019s putting fungus and immune cells together to see how they react, which could explain why mammalian lung tissue responds to <em>Cocci<\/em> the way it does: white blood cells rushing to the fungus in attempt to kill it, but dying themselves because the fungal cell is too large or toxic. In a healthy response, this eventually works enough to create a self-contained nodule. When the body doesn\u2019t respond appropriately, though, surrounding tissue starts dying.<\/p>\n<p>Other research includes examining host cells and fungal cells to see if there are different variations of the fungus, missing genes in host cells or some clue that could explain the disparity in Valley fever responses.<\/p>\n<p>She also wants to look at where <em>Cocci<\/em> originates in nature, which requires collecting DNA from dust and soil samples to see if the fungus is present. To do this she and her team will have to collect thousands of samples, preferably from the same 100 or so sites once a month for a year or more. That could tell her if the fungus is more likely to be present in certain seasons or in wetter, dryer, hotter or windier times of the year.<\/p>\n<figure id=\"attachment_46820\" aria-describedby=\"caption-attachment-46820\" style=\"width: 300px\" class=\"wp-caption alignright\"><a href=\"http:\/\/in.nau.edu\/news\/wordpresst\/uploads\/sites\/153\/wp-content\/uploads\/2017\/03\/Unknown.png\"><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-46820 size-medium\" src=\"http:\/\/in.nau.edu\/news\/wordpresst\/uploads\/sites\/153\/wp-content\/uploads\/2017\/03\/Unknown-300x257.png\" alt=\"Cocci, the fungus that causes Valley fever\" width=\"300\" height=\"257\" srcset=\"https:\/\/in.nau.edu\/wp-content\/uploads\/sites\/402\/2017\/03\/Unknown-300x257.png 300w, https:\/\/in.nau.edu\/wp-content\/uploads\/sites\/402\/2017\/03\/Unknown.png 457w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/a><figcaption id=\"caption-attachment-46820\" class=\"wp-caption-text\">Microscopic images of Cocci bacteria, the fungus that causes Valley fever<\/figcaption><\/figure>\n<p><strong>What we know about Valley fever<\/strong><\/p>\n<p><em>Where it\u2019s found<\/em><\/p>\n<p>Valley fever is named after the San Joaquin Valley in California, but <em>Cocci<\/em> was discovered in the late 1800s in Argentina. It\u2019s found throughout North, Central and South America but nowhere outside the New World. The large majority of reports of either the fungus or Valley fever are in the Sonoran Desert, which includes a sizable chunk of southern Arizona.<\/p>\n<p><em>Who\u2019s affected<\/em><\/p>\n<p>Research shows all mammals are susceptible. Humans and dogs are the most frequent victims, but scientists have found it in wolves and even dolphins. There have been a few instances of Valley fever in reptiles, but Barker said those were zoo animals, which tend to experience higher stress than animals in the wild, so it was difficult to draw a larger conclusion.<\/p>\n<p><em>Some causes of the variation in severity<\/em><\/p>\n<p>Scientists can\u2019t fully explain the variation in disease, but they have found some culprits, Barker said. The number of spores a person is exposed to affects the severity of illness. In a lab, mice could shake off exposure to 10 spores but got sicker for longer when exposed to 100 spores. Mice exposed to 1,000 spores died, almost without exception.<\/p>\n<p>People with compromised immune systems also are likelier to get sicker from Valley fever as with most infectious diseases, Barker said. For example, cancer and transplant patients whose immune symptoms have been suppressed to help them fight the initial diseases often can\u2019t mount the immune response needed.<\/p>\n<p><em>Some knowledge of its history<\/em><\/p>\n<p>Pockets of the fungus found out in nature have been connected to dead and decaying animals below the surface, Barker said. Scientists have found some connections with a group of rodents, although they can\u2019t draw that conclusion with certainty.<\/p>\n<p><strong>What we don\u2019t know about Valley fever<\/strong><\/p>\n<p><em>Why people are affected the way they<\/em> <em>are<\/em><\/p>\n<p>\u201cIn a very small percentage of people, it just overwhelms their immune system, or maybe they inhaled a lot of the fungal spores,\u201d Barker said. \u201cWe just don\u2019t really understand why.\u201d<\/p>\n<p><em>What effect a changing climate may have on the fungus<\/em><\/p>\n<figure id=\"attachment_46821\" aria-describedby=\"caption-attachment-46821\" style=\"width: 300px\" class=\"wp-caption alignleft\"><a href=\"http:\/\/in.nau.edu\/news\/wordpresst\/uploads\/sites\/153\/wp-content\/uploads\/2017\/03\/Unknown-1.png\"><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-46821 size-medium\" src=\"http:\/\/in.nau.edu\/news\/wordpresst\/uploads\/sites\/153\/wp-content\/uploads\/2017\/03\/Unknown-1-300x205.png\" alt=\"Cocci, the fungus that causes Valley fever\" width=\"300\" height=\"205\" srcset=\"https:\/\/in.nau.edu\/wp-content\/uploads\/sites\/402\/2017\/03\/Unknown-1-300x205.png 300w, https:\/\/in.nau.edu\/wp-content\/uploads\/sites\/402\/2017\/03\/Unknown-1.png 471w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/a><figcaption id=\"caption-attachment-46821\" class=\"wp-caption-text\">Microscopic images of Cocci bacteria, the fungus that causes Valley fever<\/figcaption><\/figure>\n<p>\u201cThat\u2019s what\u2019s actually fascinated me about this organism,\u201d Barker said. \u201cWhy is it only in the New World? Why is it so concentrated in the Sonoran Desert? What is its natural host? What does it associate with in the environment? What is it doing in the environment?\u201d<\/p>\n<p>That last question is especially fraught. Since scientists don\u2019t know how the fungus interacts with other parts of the environment, they don\u2019t know how factors like climate change will affect how it behaves. It is possible that as the Earth\u2019s temperature rises, climates will dry out and the fungus will be able to grow in places it previously couldn\u2019t inhabit.<\/p>\n<p>\u201cWe want to know if certain areas, certain environments and certain times of the year correlate to higher rates,\u201d she said. \u201cThat\u2019s the most direct public health mediation we could do, actually figuring out if there really is something in the environment.\u201d<\/p>\n<p><em>How much future risk the disease presents<\/em><\/p>\n<p>Barker didn\u2019t get sick the first time she was exposed to Valley fever. Decades from now, however, when age takes its natural toll on her immune system, she has no idea what the dormant nodule may do.<\/p>\n<p>\u201cIt\u2019s something we don\u2019t know,\u201d she said. \u201cIt\u2019s something we have not looked at.\u201d<\/p>\n<p><em>How to efficiently diagnose it<\/em><\/p>\n<p>Valley fever takes an average of four doctor\u2019s visits to diagnose, Barker said. That\u2019s potentially a month or more of feeling lethargic, under the weather and getting unnecessary treatments for diseases the patient doesn\u2019t have. It\u2019s also several weeks of the fungus continuing to grow and possibly moving into other parts of the body, like the joints.<\/p>\n<p>The research community has created a quicker, more effective diagnostic tool for Valley fever, which looks at DNA present in sputum of lavage fluid, but it is not yet clinically available. However, because the symptoms of the disease are similar to the flu, it\u2019s rare for Valley fever to be a consideration, particularly outside of Arizona.<\/p>\n<p><em>How to treat or prevent it<\/em><\/p>\n<p>Antibiotics do not work. Antifungals may\u2014their effectiveness is still being tested\u2014but even antifungals don\u2019t wipe the disease from the host\u2019s body. The medication forces the fungus into dormancy, created nodules like the one Barker\u2019s doctor found in her lung.<\/p>\n<p>Some infected individuals have to take antifungals for the rest of their lives to keep the fungus under control, while others don\u2019t. Barker said that dependency has cropped up as she\u2019s worked with dogs and rehabilitating Mexican grey wolves at the Southwest Wildlife Conservation Center in North Scottsdale.<\/p>\n<p>\u201cIf you do suspect Valley fever, get your dog to the vet and you get to the doctor and ask for the test,\u201d Barker said.<\/p>\n","protected":false},"excerpt":{"rendered":"<p><a class=\"search-results-excerpt-link\" href=\"https:\/\/in.nau.edu\/news\/bridget-barker\/\">Bridget Barker remembers the day a doctor found a weird nodule in one of her lungs. The Northern Arizona University biology professor felt a moment of panic\u2014lung cancer!\u2014before her brain asserted the likelier possibility. At some point the biology professor had been exposed to Valley fever, a fungal infection common in the hot, dry regions&hellip;<\/a><\/p>\n","protected":false},"author":59,"featured_media":46785,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_acf_changed":false,"footnotes":""},"categories":[1],"tags":[],"class_list":["post-46783","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-faculty-staff"],"acf":[],"_links":{"self":[{"href":"https:\/\/in.nau.edu\/news\/wp-json\/wp\/v2\/posts\/46783","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/in.nau.edu\/news\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/in.nau.edu\/news\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/in.nau.edu\/news\/wp-json\/wp\/v2\/users\/59"}],"replies":[{"embeddable":true,"href":"https:\/\/in.nau.edu\/news\/wp-json\/wp\/v2\/comments?post=46783"}],"version-history":[{"count":0,"href":"https:\/\/in.nau.edu\/news\/wp-json\/wp\/v2\/posts\/46783\/revisions"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/in.nau.edu\/news\/wp-json\/wp\/v2\/media\/46785"}],"wp:attachment":[{"href":"https:\/\/in.nau.edu\/news\/wp-json\/wp\/v2\/media?parent=46783"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/in.nau.edu\/news\/wp-json\/wp\/v2\/categories?post=46783"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/in.nau.edu\/news\/wp-json\/wp\/v2\/tags?post=46783"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}