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Publishing data Accordion Closed<\/span><\/h4>\n <\/span>\n <\/div>\n <\/a>\n
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To share data using the data portal, perform the following steps while SSH’d into Monsoon<\/a>:<\/p>\n
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Change directory to your project directory. The publish script must be ran there. For example, if your project is called hpc_project<\/span>, you’d run:<\/li>\n<\/ol>\n
cd \/projects\/hpc_project<\/code><\/p>\n
\nRun the publish_data<\/span> script. When provided with no files to publish, it will print some usage information. If one or more files and\/or directories are specified, those files and\/or directories will be published to the web.For example, if you wanted to publish the following files and directories:\n- \/projects\/hpc_project\/january_results<\/span>\r\n- \/projects\/hpc_project\/computational_data\/dataset1.csv<\/span>\r\n- \/projects\/hpc_project\/computational_data\/dataset2.txt<\/span>\r\n<\/pre>\nYou would run: \npublish_data january_results computational_data\/dataset1.csv computational_data\/dataset2.txt<\/code><\/p><\/li>\n<\/ol>\n\nYour data can now be accessed at https:\/\/rcdata.nau.edu\/<project_name><\/span>. Using the previous examples, the URL would be https:\/\/rcdata.nau.edu\/hpc_project<\/span>.<\/li>\n<\/ol>\n<\/body><\/html>\n\n <\/div>\n<\/div>\n\n\n\n \n \n Unpublishing data Accordion Closed<\/span><\/h4>\n <\/span>\n <\/div>\n <\/a>\n \n \n\nIf you wish to unpublish files, the unpublish_data<\/span> script works similarly:<\/p>\n\nChange directory to your project directory. \nFor example, if your project is called hpc_project<\/span>, you’d run: \ncd \/projects\/hpc_project<\/code><\/li>\n<\/ol>\n\nRun the unpublish_data<\/span> script. For example, to unpublish the following files:\n- dataset1.csv<\/span> \r\n- january_results\/bad_results.out<\/span>\r\n<\/pre>\nyou would run: \nunpublish_data january_results\/bad_results.out computational_data\/dataset1.csv<\/code> \nif you wanted to unpublish all of the january_results<\/span> directory, you’d run: \nunpublish_data january_results<\/code><\/p><\/li>\n<\/ol>\n Once done, the data will still be in your project directory, but will no longer appear on the web.<\/p>\n<\/body><\/html>\n\n <\/div>\n<\/div>\n\n\n \n \n \n Optionally securing your data Accordion Closed<\/span><\/h4>\n <\/span>\n <\/div>\n <\/a>\n \n \n\nTo secure your data so only users with authorized credentials can access your published data, use the secure_published_data<\/span> script to secure your published site.<\/p>\n secure_published_data \/projects\/hpc_project<\/code><\/p>\n The script will create a file under \/projects\/hpc_project\/public_data\/<\/span> called .htaccess<\/span> and will automatically fill it with the following contents:<\/p>\n AuthType Basic \nAuthName \"Restricted Area\" \nAuthUserFile \"\/projects\/hpc_project\/.htpasswd\" \nrequire valid-user<\/code><\/p>\n The secure_published_data<\/span> script will also ask you if you would like to add your first user. To add your first user, navigate to your projects folder and run the following command:<\/p>\n htpasswd -cB .htpasswd <username><\/code><\/p>\n To add subsequent users, navigate to your projects folder and run the following command:<\/p>\n htpasswd -B .htpasswd <username><\/code><\/p>\n To change the password of a user, you can re-run the command above for the target user.<\/p>\n<\/body><\/html>\n\n <\/div>\n<\/div>\n\n\n\n \n \n FAQs Accordion Closed<\/span><\/h4>\n <\/span>\n <\/div>\n <\/a>\n \n \n\nWhat happens when I delete files in my project area that have been published?<\/strong><\/p>\n The files remain published.<\/p>\n What happens when I manually delete files from the public_data<\/span> area?<\/strong><\/p>\n The files are unpublished effectively. The files that were published still remain in your project area. \n<\/p><\/body><\/html>\n\n <\/div>\n<\/div>\n\n","protected":false},"excerpt":{"rendered":" Data Portal Researchers utilizing Monsoon’s compute power now have the ability to share project data with colleagues via a web browser. Any individual files or directories in your \/projects\/<project_name>\/ folder can be shared. No file is too large, or too small. A long-term storage space is required for this service to work. To obtain a […]<\/p>\n","protected":false},"author":180,"featured_media":656,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_relevanssi_hide_post":"","_relevanssi_hide_content":"","_relevanssi_pin_for_all":"","_relevanssi_pin_keywords":"","_relevanssi_unpin_keywords":"","_relevanssi_related_keywords":"","_relevanssi_related_include_ids":"","_relevanssi_related_exclude_ids":"","_relevanssi_related_no_append":"","_relevanssi_related_not_related":"","_relevanssi_related_posts":"","_relevanssi_noindex_reason":"","ring_central_script_selection":"","footnotes":""},"class_list":["post-649","page","type-page","status-publish","has-post-thumbnail","hentry"],"_links":{"self":[{"href":"https:\/\/in.nau.edu\/arc\/wp-json\/wp\/v2\/pages\/649","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/in.nau.edu\/arc\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/in.nau.edu\/arc\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/in.nau.edu\/arc\/wp-json\/wp\/v2\/users\/180"}],"replies":[{"embeddable":true,"href":"https:\/\/in.nau.edu\/arc\/wp-json\/wp\/v2\/comments?post=649"}],"version-history":[{"count":17,"href":"https:\/\/in.nau.edu\/arc\/wp-json\/wp\/v2\/pages\/649\/revisions"}],"predecessor-version":[{"id":3749,"href":"https:\/\/in.nau.edu\/arc\/wp-json\/wp\/v2\/pages\/649\/revisions\/3749"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/in.nau.edu\/arc\/wp-json\/wp\/v2\/media\/656"}],"wp:attachment":[{"href":"https:\/\/in.nau.edu\/arc\/wp-json\/wp\/v2\/media?parent=649"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}

Advanced Research Computing<\/h3>\n <\/div>\n \n \n \n <\/i>\n Email:<\/span>\n <\/div>\n ask-arc​@nau.edu<\/div>\n <\/a>\n <\/div>\n<\/div>\n\n<\/p>\n\n

Data Portal<\/h1>\nResearchers utilizing Monsoon’s compute power now have the ability to share project data with colleagues via a web browser. Any individual files or directories in your \/projects\/<project_name>\/<\/span> folder can be shared. No file is too large, or too small.<\/p>\n

Unpublishing data Accordion Closed<\/span><\/h4>\n <\/span>\n <\/div>\n <\/a>\n \n \n\nIf you wish to unpublish files, the unpublish_data<\/span> script works similarly:<\/p>\n

Advanced Research Computing<\/h3>\n <\/div>\n
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